CDS

Accession Number TCMCG007C57762
gbkey CDS
Protein Id XP_009116818.1
Location complement(join(37662342..37662590,37662665..37662718,37662836..37662982,37663048..37663254,37663329..37663713,37663834..37663916))
Gene LOC103841976
GeneID 103841976
Organism Brassica rapa

Protein

Length 374aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_009118570.2
Definition 3-methyl-2-oxobutanoate hydroxymethyltransferase 2, mitochondrial isoform X1 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category H
Description Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate
KEGG_TC -
KEGG_Module M00119        [VIEW IN KEGG]
KEGG_Reaction R01226        [VIEW IN KEGG]
KEGG_rclass RC00022        [VIEW IN KEGG]
RC00200        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K00606        [VIEW IN KEGG]
EC 2.1.2.11        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00770        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01110        [VIEW IN KEGG]
map00770        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01110        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0003864        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005739        [VIEW IN EMBL-EBI]
GO:0006082        [VIEW IN EMBL-EBI]
GO:0006575        [VIEW IN EMBL-EBI]
GO:0006732        [VIEW IN EMBL-EBI]
GO:0006766        [VIEW IN EMBL-EBI]
GO:0006767        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008270        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009108        [VIEW IN EMBL-EBI]
GO:0009110        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0015939        [VIEW IN EMBL-EBI]
GO:0015940        [VIEW IN EMBL-EBI]
GO:0016053        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016741        [VIEW IN EMBL-EBI]
GO:0016742        [VIEW IN EMBL-EBI]
GO:0019752        [VIEW IN EMBL-EBI]
GO:0032787        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0042364        [VIEW IN EMBL-EBI]
GO:0042398        [VIEW IN EMBL-EBI]
GO:0043167        [VIEW IN EMBL-EBI]
GO:0043169        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043436        [VIEW IN EMBL-EBI]
GO:0043603        [VIEW IN EMBL-EBI]
GO:0043604        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044283        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046394        [VIEW IN EMBL-EBI]
GO:0046872        [VIEW IN EMBL-EBI]
GO:0046914        [VIEW IN EMBL-EBI]
GO:0050897        [VIEW IN EMBL-EBI]
GO:0051186        [VIEW IN EMBL-EBI]
GO:0051188        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0072330        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGATACTAGACGATGCTCATCGATGCGTAGATAGAGAGAGTTCGAAAGGAGTCAGCTTTGGAAGAATCGGAGCCACGAGCGCACGCATCTCTCGTTCCCTCAGAACCGTAACCGCCTCCCGGTTAATGAGCAACGTACCGGAGAATACCGTATACGGAGGACCCAAACCGCAAAACCCGAACCAGAGAGTGACTCTGACTCAGCTAAGACAGAAACATAAGAAAGGCGAGGCGATAACCGTCGTCACCGCTTACGACTACCCTTCCGCCGTTCAGGTCGACAGAGCCGGAATCGATGTTTGTCTCGTCGGAGACTCAGCTTCCATGGTTGTCCATGGCCACGACACAACTCTTCCCATCTCCTTAGACGAGATGCTCGTTCACTGCCGCGCCGTTGCTCGTGGTGCCAAAAGACCACTTCTTGTCGGTGATTTGCCCTTTGGTGCATACGAGTCCAGCACCATTCAGGCGGTTGATAGTGCAGTTAGAGTGTTGAAAGAAGGAGGGATGGATGCTATTAAGCTAGAAGGAGGGTCACCGTCACGGATCACTGCTGCTAGATCCATTGTGGAAGCAGGGATTGCGGTTATGGGACATGTTGGTTTGACTCCTCAAGCTATAAGCGTTCTTGGTGGGTTCAGACCACAAGGGAGGAACATAGCTAGTGCTGTTAAGGTTGTGGAAACTGCAATGGCTTTACAAGAAGCTGGATGCTTTTCGGTTGTGTTAGAATGTGTTCCACCTCCTGTGGCTGCTGCTGCAACCTCTGCTCTTCATATTCCAACCATTGGCATTGGAGCTGGCCCTTTCTGCAGTGGACAGGTTTTAGTCTACCATGACCTTCTGGGAATGATGCAGCATCCACATCATGCTAAGGTTACTCCAAAGTTTTGCAAGCAGTATGCTCAAGTAGGAGAAGTTATCAACAAAGCTCTCTTGGAATATAAGGAAGAAGTATCCAAACACTCGTTTCCAGGTCCTTTTCACAGCCCTTACAAGATCTCCTCAAACGACTTGAACGGATTCTTAAGCGAGTTACAGAAACTGGGGTTAGATGAGGCTGCTTCTGCTGCGGCAGCATCAGCTGAGAAGATGGAGTCTTCAGCTTCACTCTCTTCTCAGTGA
Protein:  
MILDDAHRCVDRESSKGVSFGRIGATSARISRSLRTVTASRLMSNVPENTVYGGPKPQNPNQRVTLTQLRQKHKKGEAITVVTAYDYPSAVQVDRAGIDVCLVGDSASMVVHGHDTTLPISLDEMLVHCRAVARGAKRPLLVGDLPFGAYESSTIQAVDSAVRVLKEGGMDAIKLEGGSPSRITAARSIVEAGIAVMGHVGLTPQAISVLGGFRPQGRNIASAVKVVETAMALQEAGCFSVVLECVPPPVAAAATSALHIPTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAKVTPKFCKQYAQVGEVINKALLEYKEEVSKHSFPGPFHSPYKISSNDLNGFLSELQKLGLDEAASAAAASAEKMESSASLSSQ